Fritz Lekschas, BSc, MSc
Biography
Graduate Student in Computer Science
Fritz is a PhD student in Computer Science with Hanspeter Pfister at Harvard Paulson School of Engineering and Applied Sciences. Before starting his PhD, he was a visting graduate student in the lab while he finished his Master’s thesis on visual exploration of biomedical data repositories.
News
- HiGlass Released and Preprint Posted
- HiPiler Preprint on the bioRxiv
- Gehlenborg Lab will present five talks at ISMB 2018
- HiGlass Published in Genome Biology
- Papers, Posters, and Presentations at IEEE VIS 2019
- Best Poster and Best Paper Honorable Mention at IEEE VIS
Media
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Nature News (2017)
TechBlog: HiPiler simplifies chromatin structure analysis -
"Using bioinformatic algorithms, researchers can query chromatin-contact datasets to find all such structures. But these algorithms may return thousands of hits. How is a researcher to study them? Enter HiPiler. Developed by Gehlenborg’s lab in collaboration with the lab of Hanspeter Pfister at the John A. Paulson School of Engineering and Applied Sciences at Harvard, HiPiler excises these features and presents them on a canvas as miniature snippets — basically tiny segments of the full-sized contact map, which users can then organize, sort, and cluster based on parameters such as noise or location."
Publications
- Visual Pattern-Driven Exploration of Big Data
- HiGlass: web-based visual exploration and analysis of genome interaction maps
- HiPiler: Visual Exploration Of Large Genome Interaction Matrices With Interactive Small Multiples
- SATORI: A System for Ontology-Guided Visual Exploration of Biomedical Data Repositories
- Peax: Interactive Visual Pattern Search in Sequential Data Using Unsupervised Deep Representation Learning
- Pattern-Driven Navigation in 2D Multiscale Visualizations with Scalable Insets
- A Generic Framework and Library for Exploration of Small Multiples through Interactive Piling
- Gosling: A Grammar-based Toolkit for Scalable and Interactive Genomics Data Visualization
- Halyos: A patient-facing visual EHR interface for longitudinal risk awareness