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UpSetR

Description

UpSetR is an R package to generate static UpSet plots. The UpSet technique visualizes set intersections in a matrix layout and introduces aggregates based on groupings and queries. The matrix layout enables the effective representation of associated data, such as the number of elements in the aggregates and intersections, as well as additional summary statistics derived from subset or element attributes.

Publications

Websites

Media

The OpenHelix Blog (2014): Video Tip of the Week: UpSet about genomics Venn Diagrams?
"Looking for both effective and efficient representation of the types of data genomics researchers need, this interactive tool is a really nice way to explore which items belong in which subset. And, of course, which ones don’t. But that’s just the beginning."

Software

GitHub

Funding